📑Challenges and opportunities in network-based solutions for biological questions
📘Journal: Briefing in Bioinformatics (I.F.=13.994)
🗓Publish year: 2022
📎 Study the paper
📲Channel: @Bioinformatics
#network #challenges
📘Journal: Briefing in Bioinformatics (I.F.=13.994)
🗓Publish year: 2022
📎 Study the paper
📲Channel: @Bioinformatics
#network #challenges
👍5
📄Network biology: Recent advances and challenges
📘Journal: Gene & Protein in Disease
🗓Publish year: November, 2022
📎 Study the paper
📲Channel: @Bioinformatics
#review #network #biology
📘Journal: Gene & Protein in Disease
🗓Publish year: November, 2022
📎 Study the paper
📲Channel: @Bioinformatics
#review #network #biology
👍10
📃Temporal networks in biology and medicine: a survey on models, algorithms, and tools
📘Journal: Network Modeling Analysis in Health Informatics and Bioinformatics
🗓Publish year: 2022
📎 Study the paper
📲Channel: @Bioinformatics
#review #network #temporal
📘Journal: Network Modeling Analysis in Health Informatics and Bioinformatics
🗓Publish year: 2022
📎 Study the paper
📲Channel: @Bioinformatics
#review #network #temporal
👍7
🎥 Network Biology: Introduction to STRING and Cytoscape
👨🏫 Part of the "Statistical Methods in Bioinformatics" Ph.D. course offered by University of Copenhagen
🎞 Watch
👨💻Associated hands-on exercises
📲Channel: @Bioinformatics
#video #network_biology #STRING #Cytoscape
👨🏫 Part of the "Statistical Methods in Bioinformatics" Ph.D. course offered by University of Copenhagen
🎞 Watch
👨💻Associated hands-on exercises
📲Channel: @Bioinformatics
#video #network_biology #STRING #Cytoscape
YouTube
Network Biology: Introduction to STRING and Cytoscape
This lecture and software demo will cover the STRING database of protein interactions, related online database resources, the Cytoscape network analysis framework, and how the Cytoscape stringApp allows these to all be used together for omics data visualization.…
👍6❤3👌2
📹 Network Pharmacology
💥Recorded workshop
▫️ Session 1: Database Mining
▫️ Session 2: Network Construction using Cytoscape
📁 Complete workshop material
📲Channel: @Bioinformatics
#workshop #video #Pharmacology #network
💥Recorded workshop
▫️ Session 1: Database Mining
▫️ Session 2: Network Construction using Cytoscape
📁 Complete workshop material
📲Channel: @Bioinformatics
#workshop #video #Pharmacology #network
YouTube
Workshop on Network Pharmacology (Part-1): Online Session on Database Mining
Network pharmacology approach has many applications in drug discovery and repurposing. It attempts to predict drug action through interactions with multiple targets using computational methods on available data. The mechanistic plausibility of natural products…
👏8👍3🙏2❤1
🎞Network biology: Connecting new omics data with existing literature
💥Prof. Lars Juhl Jensen from Technical University of Denmark
📽 Watch
📲Channel: @Bioinformatics
#video #network
💥Prof. Lars Juhl Jensen from Technical University of Denmark
📽 Watch
📲Channel: @Bioinformatics
#video #network
YouTube
Network biology: Connecting new omics data with existing literature
Recording of my presentation from the excellent Boehringer Ingelheim Fonds alumni event "40 years with BIF". My presentation gives a broad overview of network biology, the STRING database, use of deep learning for mining literature and omics data, as well…
👏5❤2👍2👌1
Forwarded from Network Analysis Resources & Updates
📄Network Medicine in Pathobiology
📘 journal: The American Journal of Pathology(I.F=5.1)
🗓Publish year: 2019
📎Study paper
📲Channel: @ComplexNetworkAnalysis
#paper #Pathobiology #network #Medicine
📘 journal: The American Journal of Pathology(I.F=5.1)
🗓Publish year: 2019
📎Study paper
📲Channel: @ComplexNetworkAnalysis
#paper #Pathobiology #network #Medicine
👍2
Forwarded from Network Analysis Resources & Updates
📃 A Review of Link Prediction Applications in Network Biology
🗓 Publish year: 2023
🧑💻Authors: Ahmad F. Al Musawi, Satyaki Roy, Preetam Ghosh
🏢Universities: Virginia Commonwealth University, University of Alabama in Huntsville
📎 Study the paper
📲Channel: @ComplexNetworkAnalysis
#review #Network_Biology #Link_Prediction
🗓 Publish year: 2023
🧑💻Authors: Ahmad F. Al Musawi, Satyaki Roy, Preetam Ghosh
🏢Universities: Virginia Commonwealth University, University of Alabama in Huntsville
📎 Study the paper
📲Channel: @ComplexNetworkAnalysis
#review #Network_Biology #Link_Prediction
👍3
📄Application of Multilayer Network Models in Bioinformatics
📗 Journal: Oral Diseases (I.F.=3.7)
🗓 Publish year: 2023
🧑💻Authors: Yuanyuan Lv, Shan Huang, Tianjiao Zhang. Bo Gao
🏢Universities: Hainan Normal University, Haikou, China - Northeast Forestry University, Harbin, China
📎 Study the paper
📲Channel: @Bioinformatics
#review #multilayer #network
📗 Journal: Oral Diseases (I.F.=3.7)
🗓 Publish year: 2023
🧑💻Authors: Yuanyuan Lv, Shan Huang, Tianjiao Zhang. Bo Gao
🏢Universities: Hainan Normal University, Haikou, China - Northeast Forestry University, Harbin, China
📎 Study the paper
📲Channel: @Bioinformatics
#review #multilayer #network
👍3❤1
📑 Network pharmacology: towards the artificial intelligence-based precision traditional Chinese medicine
📗Journal: Briefings in Bioinformatics (I.F.= 9.5)
🗓 Publish year: 2024
🧑💻Authors: Peng Zhang, Dingfan Zhang, Wuai Zhou, ...
🏢University: Tsinghua University, China
📎 Study the paper
📲Channel: @Bioinformatics
#review #pharmacology #network #ai #medicine
📗Journal: Briefings in Bioinformatics (I.F.= 9.5)
🗓 Publish year: 2024
🧑💻Authors: Peng Zhang, Dingfan Zhang, Wuai Zhou, ...
🏢University: Tsinghua University, China
📎 Study the paper
📲Channel: @Bioinformatics
#review #pharmacology #network #ai #medicine
👍8🤔2
Forwarded from Network Analysis Resources & Updates
📃Network Learning for Biomarker Discovery
🗓 Publish year: 2023
📘Journal: International Journal of Network Dynamics and Intelligence (IJNDI)
🧑💻Authors: Yulian Ding, Minghan Fu, Ping Luo, Fang-Xiang Wu
🏢Universities: University of Saskatchewan, S7N 5A9, Saskatoon, Canada,
University Health Network, Toronto, ON M5G 1L7, Canada,
University of Saskatchewan, S7N 5A9, Saskatoon, Canada
📎 Study paper
📱Channel: @ComplexNetworkAnalysis
#paper #Network #Learning #Biomarker #Discovery
🗓 Publish year: 2023
📘Journal: International Journal of Network Dynamics and Intelligence (IJNDI)
🧑💻Authors: Yulian Ding, Minghan Fu, Ping Luo, Fang-Xiang Wu
🏢Universities: University of Saskatchewan, S7N 5A9, Saskatoon, Canada,
University Health Network, Toronto, ON M5G 1L7, Canada,
University of Saskatchewan, S7N 5A9, Saskatoon, Canada
📎 Study paper
📱Channel: @ComplexNetworkAnalysis
#paper #Network #Learning #Biomarker #Discovery
❤2👍2🔥1👏1
🎓New graph learning approaches for exploring gene and protein function
📗Doctoral Thesis from ETH Zurich
🗓Publish year: 2024
📎 Study thesis
📲Channel: @Bioinformatics
#thesis #network #gene #protein #graph #deep_learning #gnn
📗Doctoral Thesis from ETH Zurich
🗓Publish year: 2024
📎 Study thesis
📲Channel: @Bioinformatics
#thesis #network #gene #protein #graph #deep_learning #gnn
👍9❤2
📃Network Modeling and Control of Dynamic Disease Pathways, Review and Perspectives
📘Journal: IEEE/ACM Transactions on Computational Biology and Bioinformatics (I.F.=3.6)
🗓Publish year: 2024
🧑💻Authors: Yen-Che Hsiao; Abhishek Dutta
🏢University: University of Connecticut, USA
📎 Study the paper
📲Channel: @Bioinformatics
#review #pathway #network
📘Journal: IEEE/ACM Transactions on Computational Biology and Bioinformatics (I.F.=3.6)
🗓Publish year: 2024
🧑💻Authors: Yen-Che Hsiao; Abhishek Dutta
🏢University: University of Connecticut, USA
📎 Study the paper
📲Channel: @Bioinformatics
#review #pathway #network
👍6❤1👏1👌1
🎓 From multi-omics data to global association networks: Application to disease module finding and pathway analysis
📔Doctoral thesis from Stockholm University, Sweden
🗓Publish year: 2024
📎 Study thesis
📲Channel: @Bioinformatics
#thesis #multi_omics #pathway #network
📔Doctoral thesis from Stockholm University, Sweden
🗓Publish year: 2024
📎 Study thesis
📲Channel: @Bioinformatics
#thesis #multi_omics #pathway #network
👍10
📑 Enhancing Molecular Network-Based Cancer Driver Gene Prediction Using Machine Learning Approaches: Current Challenges and Opportunities
📓 Journal: Journal of Cellular and Molecular Medicine (I.F.=4.3)
🗓Publish year: 2025
🧑💻Authors: Hao Zhang, Chaohuan Lin, Ying'ao Chen, ...
🏢Universities: Wenzhou Medical University - University of Chinese Academy of Sciences, China
📎 Study the paper
📲Channel: @Bioinformatics
#review #cancer #network #driver_gene #machine_learning
📓 Journal: Journal of Cellular and Molecular Medicine (I.F.=4.3)
🗓Publish year: 2025
🧑💻Authors: Hao Zhang, Chaohuan Lin, Ying'ao Chen, ...
🏢Universities: Wenzhou Medical University - University of Chinese Academy of Sciences, China
📎 Study the paper
📲Channel: @Bioinformatics
#review #cancer #network #driver_gene #machine_learning
👍3🔥1👏1
🎬 Inferring Biological Networks
💥 from Claudia Solis-Lemus, Wisconsin Institutes for Discovery, UW-Madison
🎞 Watch
📲Channel: @Bioinformatics
#video #network
💥 from Claudia Solis-Lemus, Wisconsin Institutes for Discovery, UW-Madison
🎞 Watch
📲Channel: @Bioinformatics
#video #network
YouTube
Claudia Solis-Lemus: Inferring Biological Networks
UW-Madison, Wisconsin Evolution, Evolution Seminar Series
https://evolution.wisc.edu/seminars/seminars-info/
https://evolution.wisc.edu
Claudia Solis-Lemus, Assistant Professor, Department of Plant Pathology and Wisconsin Institutes for Discovery, UW-Madison…
https://evolution.wisc.edu/seminars/seminars-info/
https://evolution.wisc.edu
Claudia Solis-Lemus, Assistant Professor, Department of Plant Pathology and Wisconsin Institutes for Discovery, UW-Madison…
👏2🔥1
📃 Biological Multi-Layer and Single Cell Network-Based Multiomics Models - a Review
🗓 Publish year: 2025
🧑💻Authors: Marcello Barylli, Joyaditya Saha, Tineke E. Buffart , ...
🏢Universities: University of Amsterdam - Amsterdam University Medical Centers - Oncode Institute, Netherlands
📎 Study the paper
📲Channel: @Bioinformatics
#review #multiomics #network #multi_layer #single_cell
🗓 Publish year: 2025
🧑💻Authors: Marcello Barylli, Joyaditya Saha, Tineke E. Buffart , ...
🏢Universities: University of Amsterdam - Amsterdam University Medical Centers - Oncode Institute, Netherlands
📎 Study the paper
📲Channel: @Bioinformatics
#review #multiomics #network #multi_layer #single_cell
👍2
Forwarded from Network Analysis Resources & Updates
📄 Network-based multi-omics integrative analysis methods in drug discovery: a systematic review
📗 Journal: BioData Mining (I.F.=4)
🗓 Publish year: 2025
🧑💻Authors: Wei Jiang, Weicai Ye, Xiaoming Tan, ...
🏢Universities: Hubei University- Sun Yat-sen University, China
📎 Study the paper
⚡️Channel: @ComplexNetworkAnalysis
#review #network #multi_omics #drug
📗 Journal: BioData Mining (I.F.=4)
🗓 Publish year: 2025
🧑💻Authors: Wei Jiang, Weicai Ye, Xiaoming Tan, ...
🏢Universities: Hubei University- Sun Yat-sen University, China
📎 Study the paper
⚡️Channel: @ComplexNetworkAnalysis
#review #network #multi_omics #drug
👍4👌2❤1👏1
📃 An introduction to and survey of biological network visualization
📗 Journal: Computers & Graphics (I.F.=2.5)
🗓Publish year: 2025
🧑💻Authors: Henry Ehlers, Nicolas Brich, Michael Krone,...
🏢Universities: University of Tübingen, Germany - Peking University, China -Osaka Seikei University, Japan, ...
📎 Study the paper
📲Channel: @Bioinformatics
#review #network #visualization #biological
📗 Journal: Computers & Graphics (I.F.=2.5)
🗓Publish year: 2025
🧑💻Authors: Henry Ehlers, Nicolas Brich, Michael Krone,...
🏢Universities: University of Tübingen, Germany - Peking University, China -Osaka Seikei University, Japan, ...
📎 Study the paper
📲Channel: @Bioinformatics
#review #network #visualization #biological
👍7❤4👏1👌1
Forwarded from Network Analysis Resources & Updates
📹 Network Analysis in Systems Biology
💥From Avi Ma'ayan, Professor at Icahn School of Medicine at Mount Sinai, New York, NY
🎞 Watch
⚡️Channel: @ComplexNetworkAnalysis
#video #network_analysis #biology
💥From Avi Ma'ayan, Professor at Icahn School of Medicine at Mount Sinai, New York, NY
🎞 Watch
⚡️Channel: @ComplexNetworkAnalysis
#video #network_analysis #biology
YouTube
Network Analysis in Systems Biology
Network Analysis in Systems Biology
Hall of the Mountain King de Kevin MacLeod tiene una licencia Atribución 4.0 de Creative Commons. https://creativecommons.org/licenses/by/4.0/
Hall of the Mountain King de Kevin MacLeod tiene una licencia Atribución 4.0 de Creative Commons. https://creativecommons.org/licenses/by/4.0/
❤1👍1